STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104247802FRIGIDA-like protein; Belongs to the Frigida family. (545 aa)    
Predicted Functional Partners:
LOC104212024
NAC domain-containing protein 90.
  
     0.521
LOC104226334
BTB/POZ domain-containing protein At3g50780.
  
     0.520
LOC104215102
Oleosin 16.4 kDa-like.
  
     0.518
LOC104218426
Oleosin 1.
  
     0.516
LOC104249080
Transcription factor CYCLOIDEA-like.
  
     0.499
LOC104225248
Protein YLS9-like.
  
     0.494
LOC104215194
G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1.
  
     0.491
LOC104239870
Exocyst subunit Exo70 family protein; Component of the exocyst complex.
  
     0.487
LOC104214767
Zinc-finger homeodomain protein 4-like.
  
     0.485
LOC104235098
Oleosin 14.9 kDa-like.
  
     0.482
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.