STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104250120Endoglucanase. (630 aa)    
Predicted Functional Partners:
LOC104210048
Lysosomal beta glucosidase-like.
    
  0.666
LOC104213198
Lysosomal beta glucosidase-like.
    
  0.666
LOC104220368
Lysosomal beta glucosidase-like.
    
  0.666
LOC104234444
Lysosomal beta glucosidase-like.
    
  0.666
LOC104241098
Lysosomal beta glucosidase-like; Belongs to the glycosyl hydrolase 3 family.
    
  0.666
LOC104247519
Lysosomal beta glucosidase-like isoform X1.
    
  0.666
LOC104245763
Lysosomal beta glucosidase-like.
    
  0.666
LOC104247502
Lysosomal beta glucosidase-like.
    
  0.666
LOC104249975
Lysosomal beta glucosidase-like.
    
  0.666
LOC104215718
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
   
 
 0.651
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.