STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104248609Uncharacterized protein LOC104248609. (181 aa)    
Predicted Functional Partners:
LOC104241030
Uncharacterized protein LOC104241030.
  
     0.517
LOC104238221
21 kDa protein-like.
  
     0.488
LOC104236810
Trihelix transcription factor PTL.
  
     0.480
LOC104239082
Uncharacterized protein LOC104239082.
  
     0.456
LOC104228517
Probable pectinesterase/pectinesterase inhibitor 51.
  
     0.452
LOC104232800
FRIGIDA-like protein; Belongs to the Frigida family.
  
     0.452
LOC104237309
Uncharacterized protein LOC104237309.
  
     0.451
LOC104228007
Uncharacterized protein LOC104228007.
  
     0.446
LOC104238617
Transcription repressor OFP7-like.
  
     0.446
LOC104227116
Uncharacterized protein LOC104227116.
  
     0.441
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.