STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104213724Protein FAR1-RELATED SEQUENCE 3-like. (856 aa)    
Predicted Functional Partners:
LOC104226235
Chromatin modification-related protein MEAF6-like.
    
 0.684
LOC104213468
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.680
LOC104219503
Transformation/transcription domain-associated protein-like isoform X1; Belongs to the PI3/PI4-kinase family.
   
 0.602
LOC104223938
Chromatin modification-related protein MEAF6.
    
 0.570
LOC104245118
DNA methyltransferase 1-associated protein 1.
   
 0.564
LOC104228282
Uncharacterized protein LOC104228282.
  
  
 0.507
LOC104238473
Uncharacterized protein LOC104238473 isoform X1.
  
  
 0.507
LOC104239993
Uncharacterized protein LOC104239993.
  
  
 0.505
LOC104245620
Uncharacterized protein LOC104245620.
  
  
 0.501
LOC104217215
Uncharacterized protein LOC104217215 isoform X1.
  
     0.466
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.