STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107824558Aquaporin PIP2-7-like; Belongs to the MIP/aquaporin (TC 1.A.8) family. (287 aa)    
Predicted Functional Partners:
LOC107787799
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.565
LOC107806864
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.565
LOC107773802
Aquaporin NIP1-1-like; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 
 0.540
LOC107823172
Probable aquaporin NIP-type; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
     0.487
LOC107801992
dnaJ protein homolog 2-like.
    
 
 0.420
LOC107824227
dnaJ protein homolog.
    
 
 0.420
LOC107766815
Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
  
 0.412
LOC107767825
Katanin p60 ATPase-containing subunit A-like 2.
  
 0.412
LOC107769801
Uncharacterized protein LOC107769801.
  
 
 0.412
LOC107779199
26S proteasome regulatory subunit 4 homolog A isoform X3; Belongs to the AAA ATPase family.
  
 
 0.412
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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