Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LEA3-2Late embryogenesis abundant protein Dc3-like. (166 aa)    
Predicted Functional Partners:
LOC107813362
Protein LE25-like.
  
  
 0.714
LOC107771717
18 kDa seed maturation protein-like.
  
  
 0.709
LOC107820380
18 kDa seed maturation protein-like.
  
  
 0.709
LOC107820379
18 kDa seed maturation protein-like.
  
  
 0.707
LOC107782373
11 kDa late embryogenesis abundant protein-like.
  
  
 0.695
LOC107784966
18 kDa seed maturation protein-like.
  
  
 0.694
LOC107775665
Protein LE25-like.
  
  
 0.691
LOC107762519
Uncharacterized protein LOC107762519.
   
  
 0.651
LOC107826195
Uncharacterized protein LOC107826195.
  
  
 0.626
LOC107771277
Late embryogenesis abundant protein D-29-like.
   
  
 0.598
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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