STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107759842Uncharacterized protein At4g06744-like. (511 aa)    
Predicted Functional Partners:
LOC107791566
Probable LRR receptor-like serine/threonine-protein kinase At5g48740.
    
 0.522
LOC107819128
Probable LRR receptor-like serine/threonine-protein kinase At5g48740.
    
 0.522
LOC107775435
Probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X1.
   
0.516
LOC107792256
Probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X2.
   
0.516
LOC107805232
Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1.
  
  0.515
LOC107818495
Probable LRR receptor-like serine/threonine-protein kinase At1g34110.
  
     0.512
LOC107803953
Receptor-like protein kinase BRI1-like 3.
  
     0.496
LOC107773027
Somatic embryogenesis receptor kinase 1-like.
  
     0.493
LOC107793276
BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.
  
  0.493
LOC107802327
Receptor-like protein kinase 2.
  
     0.491
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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