LOC107760116 protein (Nicotiana tabacum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC107760116

Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues. (118 aa)

Predicted Functional Partners:

LOC107800727

0.541

LOC107828008

0.539

LOC107765616

0.538

LOC107787212

0.538

LOC107787694

0.538

LOC107807318

0.538

LOC107780929

0.537

LOC107818499

0.537

LOC107825981

0.537

LOC107828161

0.537

Your Current Organism:

Nicotiana tabacum

NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107760116	LOC107765616	A0A1S3X0V1	A0A1S3XJB1	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	Transcription factor ILI6-like.	0.538
LOC107760116	LOC107780929	A0A1S3X0V1	A0A1S3YXH8	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	Uncharacterized protein LOC107780929.	0.537
LOC107760116	LOC107787212	A0A1S3X0V1	A0A1S3ZIT8	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	Uncharacterized protein LOC107787212.	0.538
LOC107760116	LOC107787694	A0A1S3X0V1	A0A1S3ZJT8	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	Putative disease resistance protein At1g58400.	0.538
LOC107760116	LOC107800727	A0A1S3X0V1	A0A1S4ASF2	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	Uncharacterized protein LOC107800727.	0.541
LOC107760116	LOC107807318	A0A1S3X0V1	A0A1S4BE95	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	E4 SUMO-protein ligase PIAL2-like.	0.538
LOC107760116	LOC107818499	A0A1S3X0V1	A0A1S4CFP9	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	Uncharacterized protein LOC107818499.	0.537
LOC107760116	LOC107825981	A0A1S3X0V1	A0A1S4D4P0	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	Uncharacterized protein LOC107825981.	0.537
LOC107760116	LOC107828008	A0A1S3X0V1	A0A1S4DBG0	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	Uncharacterized protein LOC107828008.	0.539
LOC107760116	LOC107828161	A0A1S3X0V1	A0A1S4DBY2	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	Transcription factor ILI5-like.	0.537
LOC107765616	LOC107760116	A0A1S3XJB1	A0A1S3X0V1	Transcription factor ILI6-like.	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	0.538
LOC107765616	LOC107780929	A0A1S3XJB1	A0A1S3YXH8	Transcription factor ILI6-like.	Uncharacterized protein LOC107780929.	0.541
LOC107765616	LOC107787212	A0A1S3XJB1	A0A1S3ZIT8	Transcription factor ILI6-like.	Uncharacterized protein LOC107787212.	0.545
LOC107765616	LOC107787694	A0A1S3XJB1	A0A1S3ZJT8	Transcription factor ILI6-like.	Putative disease resistance protein At1g58400.	0.520
LOC107765616	LOC107800727	A0A1S3XJB1	A0A1S4ASF2	Transcription factor ILI6-like.	Uncharacterized protein LOC107800727.	0.541
LOC107765616	LOC107807318	A0A1S3XJB1	A0A1S4BE95	Transcription factor ILI6-like.	E4 SUMO-protein ligase PIAL2-like.	0.537
LOC107765616	LOC107818499	A0A1S3XJB1	A0A1S4CFP9	Transcription factor ILI6-like.	Uncharacterized protein LOC107818499.	0.544
LOC107765616	LOC107825981	A0A1S3XJB1	A0A1S4D4P0	Transcription factor ILI6-like.	Uncharacterized protein LOC107825981.	0.544
LOC107765616	LOC107828008	A0A1S3XJB1	A0A1S4DBG0	Transcription factor ILI6-like.	Uncharacterized protein LOC107828008.	0.539
LOC107780929	LOC107760116	A0A1S3YXH8	A0A1S3X0V1	Uncharacterized protein LOC107780929.	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	0.537

page 1 of 5

Server load: low (10%) [HD]

Permalink

Network

Cooccurrence

Textmining

Coexpression

Experiments

Neighborhood

Databases

Fusion

© STRING Consortium 2023

Credits

Access

Info

About