STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107760103Actin-depolymerizing factor-like; Belongs to the actin-binding proteins ADF family. (146 aa)    
Predicted Functional Partners:
LOC107797995
66 kDa stress protein-like.
   
 
 0.667
LOC107811990
66 kDa stress protein-like.
   
 
 0.667
LOC107760595
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 0.666
LOC107765227
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 0.666
LOC107793271
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 0.666
LOC107801880
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 0.666
LOC107821481
Actin-like.
   
 
 0.652
ACT5_TOBAC
Actin-93; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.
   
 
 0.652
LOC107762167
Actin-like; Belongs to the actin family.
   
 
 0.631
LOC107795436
Actin.
   
 
 0.631
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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