STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107761145Zinc finger CCCH domain-containing protein 30-like. (727 aa)    
Predicted Functional Partners:
LOC107825298
UV-B-induced protein At3g17800, chloroplastic-like.
  
     0.428
LOC107819335
UV-B-induced protein At3g17800, chloroplastic-like.
  
     0.425
LOC107781920
Uncharacterized protein LOC107781920.
  
     0.422
LOC107782173
Uncharacterized protein LOC107782173 isoform X1.
  
     0.415
LOC107813845
Uncharacterized protein LOC107813845.
  
     0.412
LOC107764695
Putative F-box protein PP2-B12.
  
     0.410
LOC107771417
Uncharacterized protein LOC107771417.
  
     0.404
LOC107782174
Uncharacterized protein LOC107782174.
  
     0.404
LOC107780467
Uncharacterized protein LOC107780467.
  
     0.403
LOC107822140
Legumin A-like.
  
     0.403
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.