STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107761898Potassium transporter 11-like. (442 aa)    
Predicted Functional Partners:
LOC107832539
Potassium transporter 5-like.
  
     0.545
LOC107785731
Potassium transporter 11-like.
  
     0.544
LOC107799825
Potassium transporter 6-like.
  
     0.544
LOC107802526
Potassium transporter 5-like.
  
     0.543
LOC107828131
Putative potassium transporter 12.
  
     0.543
LOC107804499
Potassium transporter 5-like.
  
     0.542
LOC107760263
Sodium/hydrogen exchanger 1-like isoform X1.
      
 0.440
LOC107768238
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
      
 0.440
LOC107780545
Cyclic nucleotide-gated ion channel 4-like isoform X1.
      
 0.436
LOC107784033
Cyclic nucleotide-gated ion channel 4-like.
      
 0.436
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.