STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107762088Uncharacterized protein LOC107762088. (339 aa)    
Predicted Functional Partners:
LOC107830159
Uncharacterized protein LOC107830159.
  
     0.490
LOC107759050
Uncharacterized protein LOC107759050.
  
     0.481
LOC107807374
Uncharacterized protein LOC107807374.
  
     0.480
LOC107810475
Uncharacterized protein LOC107810475.
  
     0.477
LOC107803870
Uncharacterized protein LOC107803870.
  
     0.475
LOC107804102
Uncharacterized protein LOC107804102.
  
     0.474
LOC107781192
Uncharacterized protein LOC107781192.
  
     0.473
LOC107821155
Uncharacterized protein LOC107821155.
  
     0.472
LOC107767478
Uncharacterized protein LOC107767478.
  
     0.469
LOC107832811
Uncharacterized protein LOC107832811.
  
     0.461
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.