STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107762336Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. (502 aa)    
Predicted Functional Partners:
LOC107768877
Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
   
  
 0.558
LOC107796004
Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
   
  
 0.558
LOC107769603
Transcription factor MYB51-like isoform X1.
      
 0.545
LOC107773379
Myb-related protein 330-like.
      
 0.545
LOC107771685
Basic helix-loop-helix protein A-like.
      
 0.511
LOC107775860
Protein TRANSPARENT TESTA 1-like.
      
 0.511
LOC107791671
Basic helix-loop-helix protein A-like isoform X1.
      
 0.511
LOC107810519
Protein TRANSPARENT TESTA 1-like.
      
 0.511
An1b
Basic helix-loop-helix protein A-like isoform X2.
      
 0.511
LOC107803204
Protein TRANSPARENT TESTA GLABRA 1-like.
      
 0.504
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.