STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107762736Probable receptor-like protein kinase At2g42960. (508 aa)    
Predicted Functional Partners:
LOC107813028
Mitogen-activated protein kinase kinase kinase A-like; Belongs to the protein kinase superfamily.
  
 
  0.472
LOC107784888
CBL-interacting protein kinase 32-like; Belongs to the protein kinase superfamily.
  
 
  0.445
LOC107830535
Calcium-dependent protein kinase 20-like; Belongs to the protein kinase superfamily.
  
  0.431
LOC107778951
Serine/threonine-protein kinase GRIK2-like.
  
 
   0.427
LOC107803928
Mitogen-activated protein kinase kinase kinase 2-like.
  
 
  0.424
LOC107799941
Serine/threonine-protein kinase GRIK2-like isoform X1; Belongs to the protein kinase superfamily.
  
 
   0.420
LOC107787773
Mitogen-activated protein kinase kinase kinase NPK1-like.
  
 
  0.413
LOC107780531
Calcium-dependent protein kinase 24-like; Belongs to the protein kinase superfamily.
  
  0.404
LOC107784355
Calcium-dependent protein kinase 32-like.
  
  0.401
LOC107808056
Calcium-dependent protein kinase 32-like.
  
  0.401
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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