STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107762952Uncharacterized protein LOC107762952 isoform X1. (324 aa)    
Predicted Functional Partners:
LOC107816072
Uncharacterized protein LOC107816072.
  
     0.528
LOC107805485
Uncharacterized protein LOC107805485.
  
     0.523
LOC107778724
Protein WVD2-like 4.
  
     0.511
LOC107787117
Protein WVD2-like 4.
  
     0.505
LOC107819054
Uncharacterized protein LOC107819054.
  
     0.504
LOC107810733
DNA repair endonuclease UVH1.
      
 0.503
LOC107774872
Uncharacterized protein LOC107774872.
  
     0.498
LOC107802129
Uncharacterized protein LOC107802129.
  
     0.498
LOC107820788
Uncharacterized protein LOC107820788.
  
     0.497
LOC107803717
Putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial.
  
     0.493
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.