STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107763144RWD domain-containing protein 1-like. (248 aa)    
Predicted Functional Partners:
LOC107766844
Developmentally-regulated G-protein 1-like.
   
 
 0.951
LOC107782800
Developmentally-regulated G-protein 2.
   
 
 0.951
LOC107791275
Developmentally-regulated G-protein 2-like.
   
 
 0.951
LOC107767305
Developmentally-regulated G-protein 3.
   
 
 0.946
LOC107796147
Developmentally-regulated G-protein 3-like.
   
 
 0.946
LOC107798395
eIF-2-alpha kinase activator GCN1 isoform X1.
    
 
 0.764
LOC107809447
LOW QUALITY PROTEIN: eIF-2-alpha kinase activator GCN1-like.
    
 
 0.764
LOC107811220
eIF-2-alpha kinase activator GCN1-like isoform X1.
    
 
 0.764
LOC107772329
Zinc finger CCCH domain-containing protein 11-like.
   
 
 0.693
LOC107786353
Zinc finger CCCH domain-containing protein 11-like isoform X1.
   
 
 0.693
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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