STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107763379Uncharacterized protein LOC107763379. (246 aa)    
Predicted Functional Partners:
LOC107801353
Ethylene-responsive transcription factor ABI4.
      
 0.436
LOC107789884
Uncharacterized protein LOC107789884.
  
     0.427
LOC107781994
Uncharacterized protein LOC107781994.
  
     0.424
LOC107758950
Uncharacterized protein LOC107758950.
  
     0.406
LOC107759595
Uncharacterized protein LOC107759595.
  
     0.406
LOC107827200
Uncharacterized protein LOC107827200 isoform X1.
  
     0.405
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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