STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107764479F-box/kelch-repeat protein SKIP11-like. (173 aa)    
Predicted Functional Partners:
LOC107786219
MFP1 attachment factor 1-like.
  
     0.510
LOC107816218
F-box/kelch-repeat protein At1g74510-like.
  
     0.500
LOC107788999
MFP1 attachment factor 1-like.
  
     0.498
LOC107793696
MFP1 attachment factor 1-like.
  
     0.485
LOC107831332
Uncharacterized protein LOC107831332.
  
     0.484
LOC107772995
Uncharacterized protein LOC107772995.
  
     0.481
LOC107807419
MFP1 attachment factor 1-like.
  
     0.479
LOC107801854
Uncharacterized protein LOC107801854.
  
     0.472
LOC107818767
Uncharacterized protein LOC107818767.
  
     0.472
LOC107798608
BTB/POZ domain-containing protein NPY2-like; Belongs to the NPH3 family.
  
     0.470
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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