STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107764678Transcription repressor OFP13-like. (246 aa)    
Predicted Functional Partners:
LOC107815788
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.492
LOC107777487
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.491
LOC107815382
Non-specific lipid-transfer protein-like protein At2g13820; Belongs to the plant LTP family.
  
     0.491
LOC107780124
Non-specific lipid-transfer protein-like protein At2g13820; Belongs to the plant LTP family.
  
     0.489
LOC107817516
Uncharacterized protein LOC107817516.
  
     0.485
LOC107788792
Uncharacterized protein LOC107788792.
  
    0.483
LOC107767834
Uncharacterized protein LOC107767834.
  
     0.477
LOC107802827
Uncharacterized protein LOC107802827.
  
     0.473
MBP2C
Protein MICROTUBULE BINDING PROTEIN 2C; Prevents homeodomain proteins (e.g. STM) association to plasmodesmata and, consequently, cell-to-cell transport. Binds to RNA. Alters KN1 RNA-binding capacity. Regulates cytoskeleton (e.g. actin) organization that determinates cell shape (By similarity). Interferes with cell-to-cell transport of tobacco mosaic virus movement protein (TMV-MP) by mediating its accumulation at microtubules, thus interfering with cell-to-cell virus movement.
  
    0.471
LOC107780707
Uncharacterized protein LOC107780707.
  
     0.468
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.