STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107764789Putative amidase C869.01. (303 aa)    
Predicted Functional Partners:
LOC107796312
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
 
 0.923
LOC107806846
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
 
 0.923
LOC107768688
glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial-like.
 
 0.917
LOC107809113
glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial-like.
  
 0.887
LOC107764780
aspartate--tRNA ligase, chloroplastic/mitochondrial-like.
  
 0.768
LOC107812591
aspartate--tRNA ligase, chloroplastic/mitochondrial-like.
  
 0.768
LOC107826713
aspartate--tRNA ligase, chloroplastic/mitochondrial-like.
  
 0.768
LOC107764230
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.702
LOC107766867
Aldehyde dehydrogenase family 2 member B4, mitochondrial-like; Belongs to the aldehyde dehydrogenase family.
    
 0.702
LOC107777569
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.702
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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