STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107766121Mannan endo-1,4-beta-mannosidase 1; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (411 aa)    
Predicted Functional Partners:
LOC107766493
Phosphotransferase.
    
  0.661
LOC107770541
Phosphotransferase.
    
  0.661
LOC107780856
Phosphotransferase.
    
  0.661
LOC107787915
Phosphotransferase.
    
  0.661
LOC107790581
Phosphotransferase.
    
  0.661
LOC107803594
Phosphotransferase.
    
  0.661
LOC107816110
Phosphotransferase.
    
  0.661
LOC107819667
Phosphotransferase.
    
  0.661
Hxk6
Phosphotransferase.
    
  0.661
Hxk4a
Phosphotransferase.
    
  0.661
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.