STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107766416Sister chromatid cohesion protein DCC1-like. (402 aa)    
Predicted Functional Partners:
LOC107780164
Chromosome transmission fidelity protein 18 homolog isoform X1.
  
 0.991
LOC107796756
Uncharacterized protein.
   
 0.990
LOC107814091
Uncharacterized protein.
   
 0.990
LOC107786489
Chromosome transmission fidelity protein 18 homolog isoform X1.
   
 0.989
LOC107802759
Replication factor C subunit 3-like.
   
 0.957
LOC107822500
Replication factor C subunit 3-like.
   
 0.957
LOC107767254
Replication factor C subunit 4-like.
   
 0.956
LOC107779141
Replication factor C subunit 2-like.
   
 0.956
LOC107784098
Replication factor C subunit 2.
   
 0.956
LOC107789168
Replication factor C subunit 3-like.
   
 0.950
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.