STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107768395Uncharacterized protein LOC107768395. (161 aa)    
Predicted Functional Partners:
LOC107774023
GDSL esterase/lipase At1g29670-like.
  
     0.479
LOC107818335
Uncharacterized protein LOC107818335.
  
     0.458
LOC107825712
Uncharacterized protein LOC107825712.
  
     0.451
LOC107829790
Uncharacterized protein LOC107829790.
  
     0.448
LOC107773200
GDSL esterase/lipase At5g45910-like.
  
     0.446
LOC107795183
cyanidin-3-O-glucoside 2-O-glucuronosyltransferase-like.
  
     0.435
LOC107825648
GDSL esterase/lipase At1g29670-like.
  
     0.428
LOC107769138
COBRA-like protein 7.
  
     0.418
LOC107823721
Uncharacterized protein LOC107823721.
  
     0.418
LOC107771081
Cytochrome b561 and DOMON domain-containing protein At3g25290-like.
  
     0.415
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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