STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107769330Probable receptor-like protein kinase At5g15080 isoform X1; Belongs to the protein kinase superfamily. (480 aa)    
Predicted Functional Partners:
MKK4
Mitogen-activated protein kinase kinase 9; Belongs to the protein kinase superfamily.
  
 
  0.463
LOC107819291
Mitogen-activated protein kinase kinase 9-like; Belongs to the protein kinase superfamily.
  
 
  0.463
LOC107766676
CDPK-related kinase 1-like.
  
  0.421
LOC107804306
CDPK-related kinase 7-like.
  
  0.420
LOC107807681
Serine/threonine-protein kinase SRK2E-like isoform X1; Belongs to the protein kinase superfamily.
  
 
  0.414
LOC107824451
Serine/threonine-protein kinase SRK2E-like; Belongs to the protein kinase superfamily.
  
 
  0.413
LOC107819672
Serine/threonine-protein kinase SAPK2-like isoform X1.
  
 
  0.412
LOC107778103
Serine/threonine-protein kinase SAPK10-like; Belongs to the protein kinase superfamily.
  
 
  0.411
LOC107817827
Serine/threonine-protein kinase SRK2A-like; Belongs to the protein kinase superfamily.
  
 
  0.411
LOC107769218
Serine/threonine-protein kinase SRK2E-like; Belongs to the protein kinase superfamily.
  
 
  0.410
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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