STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107769843Uncharacterized protein LOC107769843. (436 aa)    
Predicted Functional Partners:
LOC107803935
NAC domain-containing protein 76-like.
  
     0.513
LOC107823316
F-box protein At1g30200-like.
  
     0.506
LOC107761637
F-box protein At4g18380-like.
  
     0.499
LOC107795715
Serine/threonine-protein kinase Nek6-like.
  
     0.496
LOC107796118
Uncharacterized protein LOC107796118.
  
     0.492
LOC107795021
Transcription factor bHLH7-like.
  
     0.490
LOC107805557
Uncharacterized protein LOC107805557.
  
     0.490
LOC107798587
Blue copper protein-like.
  
     0.489
LOC107824250
Uncharacterized protein LOC107824250.
  
     0.488
NAC6
NAC domain-containing protein 83-like.
  
     0.487
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.