STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107770124Protein PROTON GRADIENT REGULATION 5, chloroplastic-like. (119 aa)    
Predicted Functional Partners:
LOC107800613
High-light-induced protein, chloroplastic.
   
  
 0.616
LOC107778116
PGR5-like protein 1A, chloroplastic.
  
 
 0.588
LOC107796408
PGR5-like protein 1B, chloroplastic.
  
 
 0.586
LOC107805035
PGR5-like protein 1B, chloroplastic.
  
 
 0.586
LOC107819369
PGR5-like protein 1A, chloroplastic.
  
 
 0.585
PsaN
Photosystem I reaction center subunit N, chloroplastic-like.
   
  
 0.580
LOC107788489
Serine/threonine-protein kinase STN7, chloroplastic.
   
  
 0.568
LOC107821355
Serine/threonine-protein kinase STN7, chloroplastic-like.
   
  
 0.568
LOC107760712
LOW QUALITY PROTEIN: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic-like.
   
  
 0.567
LOC107805425
NAD(P)H-quinone oxidoreductase subunit T, chloroplastic-like.
   
  
 0.567
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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