STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10777014821 kDa protein-like. (217 aa)    
Predicted Functional Partners:
LOC107825223
NAC domain-containing protein 86-like.
  
     0.500
LOC107807727
NAC domain-containing protein 86-like.
  
     0.493
LOC107792698
Protein BASIC PENTACYSTEINE2-like.
  
     0.491
LOC107809553
NAC domain-containing protein 86-like.
  
     0.488
BBR/BPC1
GAGA-binding transcriptional activator.
  
     0.488
LOC107809912
NAC domain-containing protein 86-like.
  
     0.483
LOC107794334
Uncharacterized protein LOC107794334 isoform X1.
  
     0.478
LOC107829066
Uncharacterized protein LOC107829066.
  
     0.477
LOC107810170
Scarecrow-like protein 9; Belongs to the GRAS family.
  
     0.472
LOC107789643
NAC domain-containing protein 86-like.
  
     0.470
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.