STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107770522Uncharacterized protein LOC107770522. (581 aa)    
Predicted Functional Partners:
LOC107820619
Transcription factor bHLH78-like.
  
     0.512
LOC107767619
Uncharacterized protein LOC107767619.
  
     0.492
LOC107769401
Uncharacterized protein LOC107769401.
  
     0.487
LOC107824098
Transcription factor bHLH62-like isoform X1.
  
     0.487
LOC107782407
Trihelix transcription factor ASIL2-like.
  
     0.486
LOC107766568
Uncharacterized protein LOC107766568.
  
     0.479
LOC107809737
Uncharacterized protein LOC107809737.
  
     0.476
LOC107830397
Transcription factor bHLH49-like.
  
     0.472
LOC107771371
CRS2-associated factor 1, chloroplastic-like.
  
     0.470
LOC107797862
Uncharacterized protein LOC107797862 isoform X1.
  
     0.467
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.