STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107770767Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like. (429 aa)    
Predicted Functional Partners:
LOC107805666
26S proteasome non-ATPase regulatory subunit 7 homolog A.
  
 0.977
LOC107776568
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
  
 0.969
LOC107807153
26S proteasome non-ATPase regulatory subunit 6 homolog.
   
 0.961
LOC107819413
26S proteasome non-ATPase regulatory subunit 6 homolog.
   
 0.961
LOC107779199
26S proteasome regulatory subunit 4 homolog A isoform X3; Belongs to the AAA ATPase family.
   
 0.947
LOC107789506
26S proteasome regulatory subunit 4 homolog A isoform X1; Belongs to the AAA ATPase family.
   
 0.947
LOC107819147
26S proteasome regulatory subunit 4 homolog A-like; Belongs to the AAA ATPase family.
   
 0.947
LOC107782228
26S protease regulatory subunit 6A homolog; Belongs to the AAA ATPase family.
   
 0.924
LOC107800555
26S protease regulatory subunit 6A homolog; Belongs to the AAA ATPase family.
   
 0.924
LOC107803920
26S protease regulatory subunit 6A homolog; Belongs to the AAA ATPase family.
   
 0.924
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (14%) [HD]