STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107770885Chlorophyllide a oxygenase, chloroplastic-like. (531 aa)    
Predicted Functional Partners:
LOC107781977
Chlorophyll synthase, chloroplastic-like.
   
 
 0.978
LOC107794961
Chlorophyll synthase, chloroplastic-like.
   
 
 0.978
LOC107774957
Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic-like.
    
 0.975
LOC107794507
Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic-like.
    
 0.975
LOC107761536
chlorophyll(Ide) b reductase NOL, chloroplastic-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.957
LOC107762138
chlorophyll(Ide) b reductase NOL, chloroplastic-like isoform X1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.957
LOC107825949
Probable chlorophyll(Ide) b reductase NYC1, chloroplastic.
    
 0.957
LOC107825540
NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.
  
 
 0.924
POR2
NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.
  
 
 0.924
LOC107787316
NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.
  
 
 0.918
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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