STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107771126Uncharacterized protein LOC107771126 isoform X1. (715 aa)    
Predicted Functional Partners:
LOC107828652
NAC domain-containing protein 55-like.
  
     0.524
LOC107793223
NAC domain-containing protein 101-like isoform X1.
  
     0.516
LOC107807694
NAC domain-containing protein 82-like isoform X1.
  
     0.515
LOC107803501
Ninja-family protein AFP3-like.
  
     0.508
LOC107822616
Ninja-family protein AFP3-like.
  
     0.508
LOC107785798
Ninja-family protein AFP1-like isoform X1.
  
     0.504
LOC107775305
Uncharacterized protein LOC107775305.
  
     0.501
LOC107763985
Protein UPSTREAM OF FLC-like.
  
     0.486
LOC107808207
BTB/POZ domain-containing protein At3g19850-like; Belongs to the NPH3 family.
  
     0.484
LOC107822766
Protein UPSTREAM OF FLC-like.
  
     0.484
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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