STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107771414Uncharacterized protein LOC107771414. (753 aa)    
Predicted Functional Partners:
LOC107782726
Uncharacterized protein LOC107782726.
  
     0.538
LOC107781897
Uncharacterized protein LOC107781897.
  
     0.537
LOC107777253
Uncharacterized protein LOC107777253 isoform X1.
  
     0.530
LOC107791398
Putative late blight resistance protein homolog R1B-16.
  
     0.529
LOC107799165
Protein TRM32-like.
  
     0.528
LOC107790831
UPF0481 protein At3g47200-like.
  
     0.527
LOC107772962
Putative late blight resistance protein homolog R1B-11.
  
     0.526
LOC107801366
Putative late blight resistance protein homolog R1A-3.
  
     0.526
LOC107811899
UPF0481 protein At3g47200-like.
  
     0.526
LOC107830640
UPF0481 protein At3g47200-like.
  
     0.525
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.