STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107771557Putative dihydroflavonol-4-reductase. (314 aa)    
Predicted Functional Partners:
LOC107798184
LOW QUALITY PROTEIN: probable phytol kinase 2, chloroplastic.
     
 0.938
LOC107802957
Probable phytol kinase 3, chloroplastic.
     
 0.938
LOC107825879
Probable phytol kinase 3, chloroplastic.
     
 0.938
LOC107795977
Farnesylcysteine lyase-like.
     
 0.932
LOC107826766
Farnesylcysteine lyase.
     
 0.932
LOC107760928
Putative dihydroflavonol-4-reductase isoform X1.
  
  
 
0.901
LOC107803068
Putative dihydroflavonol-4-reductase isoform X1.
  
  
 
0.901
LOC107815372
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.856
LOC107787568
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.856
LOC107795411
40S ribosomal protein S29-like.
   
 0.854
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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