STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107771556Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. (951 aa)    
Predicted Functional Partners:
LOC107791052
Ceramide kinase-like isoform X1.
     
 0.932
LOC107817825
Ceramide kinase-like isoform X1.
     
 0.932
LOC107806069
Sphingolipid delta(4)-desaturase DES1-like; Sphingolipid-delta-4-desaturase required for the biosynthesis of delta-4-unsaturated sphingolipids and derivatives.
     
 0.900
LOC107807159
Sphingolipid delta(4)-desaturase DES1-like; Sphingolipid-delta-4-desaturase required for the biosynthesis of delta-4-unsaturated sphingolipids and derivatives.
     
 0.900
LOC107808948
Sphingolipid delta(4)-desaturase DES1-like; Sphingolipid-delta-4-desaturase required for the biosynthesis of delta-4-unsaturated sphingolipids and derivatives.
     
 0.900
LOC107803266
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
   
 0.837
LOC107831473
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
   
 0.837
LOC107768459
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 0.819
LOC107778170
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 0.819
LOC107790580
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 0.819
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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