STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107772026Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 2-like isoform X1. (179 aa)    
Predicted Functional Partners:
LOC107759315
Uncharacterized protein LOC107759315.
  
     0.476
LOC107805248
CSC1-like protein RXW8.
  
     0.469
LOC107826986
LOB domain-containing protein 1-like.
  
     0.467
LOC107783604
Zinc finger protein JAGGED-like.
  
     0.458
LOC107767645
Transcription factor bHLH53-like.
  
     0.454
LOC107828777
GDSL esterase/lipase At5g45910-like.
  
     0.454
LOC107814945
Uncharacterized protein At5g05190-like.
  
     0.447
LOC107766207
Protein EARLY FLOWERING 3-like isoform X1.
  
     0.445
LOC107812238
Transcription factor bHLH53-like.
  
     0.445
LOC107766356
Protein SNOWY COTYLEDON 3.
  
     0.443
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.