STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107772367Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family. (440 aa)    
Predicted Functional Partners:
LOC107773479
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
  
 
 0.980
LOC107826247
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
  
 
 0.980
NtPMM
Phosphomannomutase; Involved in ascorbic acid biosynthesis and in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.
  
 
 0.980
LOC107788918
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.974
LOC107819267
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.974
LOC107825825
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.974
LOC107787623
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like.
    
 0.942
LOC107799616
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2.
    
 0.942
LOC107823414
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like.
    
 0.942
LOC107763053
6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase-like isoform X1.
  
 
 0.905
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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