STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107772936Protein REVEILLE 8-like. (176 aa)    
Predicted Functional Partners:
LOC107792029
WD repeat-containing protein LWD1.
    
 0.614
LOC107764009
Protein LNK2-like.
   
 
 0.515
LOC107778926
Protein LNK2-like.
   
 
 0.515
LOC107787562
Protein EARLY FLOWERING 4-like.
      
 0.513
LOC107801750
Protein LNK1-like isoform X1.
  
 
 
 0.506
LOC107797919
Protein LNK1-like isoform X1.
  
 
 
 0.501
LOC107767484
Coiled-coil domain-containing protein 22 homolog isoform X1.
    
 0.490
LOC107783478
Coiled-coil domain-containing protein 22 homolog.
    
 0.490
LOC107775222
Protein LHY-like.
   
  
 0.462
LOC107786145
Protein LHY-like.
   
  
 0.462
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.