STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107773516LOW QUALITY PROTEIN: uncharacterized protein LOC107773516. (242 aa)    
Predicted Functional Partners:
LOC107759240
GTP cyclohydrolase 1.
    
  0.901
LOC107792598
GTP cyclohydrolase 1-like isoform X1.
    
  0.901
LOC107763556
7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
  0.900
LOC107831961
7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
  0.900
LOC107824707
Purple acid phosphatase.
    
 0.612
LOC107832097
Purple acid phosphatase.
    
 0.612
LOC107788146
Aspartate aminotransferase.
    
 
 0.561
LOC107801037
Aspartate aminotransferase.
    
 
 0.561
LOC107765970
Purple acid phosphatase.
    
 0.555
LOC107801984
Purple acid phosphatase.
    
 0.555
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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