STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107775165Uncharacterized protein At1g04910-like. (636 aa)    
Predicted Functional Partners:
LOC107776080
Protein SAR DEFICIENT 1-like.
  
    0.525
LOC107779824
LOB domain-containing protein 4-like.
  
     0.524
LOC107783137
Calmodulin-binding protein 60 B-like.
  
    0.523
LOC107800838
Protein SAR DEFICIENT 1-like.
  
    0.523
LOC107812967
LOB domain-containing protein 4-like.
  
     0.521
LOC107814259
LOB domain-containing protein 21-like.
  
     0.521
LOC107796066
LOB domain-containing protein 4-like.
  
     0.520
LOC107816045
LOB domain-containing protein 21-like.
  
     0.520
LOC107830019
Protein SAR DEFICIENT 1-like.
  
    0.520
LOC107768537
LOB domain-containing protein 21-like.
  
     0.518
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.