STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107775230Zinc finger MYM-type protein 1-like. (490 aa)    
Predicted Functional Partners:
LOC107821021
Uncharacterized protein LOC107821021.
  
     0.513
LOC107810007
Uncharacterized protein LOC107810007.
  
     0.503
LOC107761178
Uncharacterized protein LOC107761178.
  
     0.502
LOC107760138
Uncharacterized protein LOC107760138.
    
 0.481
LOC107804692
Uncharacterized protein LOC107804692 isoform X1.
    
 0.481
LOC107821934
Uncharacterized protein LOC107821934.
  
     0.481
LOC107787251
Uncharacterized protein LOC107787251.
  
     0.468
LOC107767701
Uncharacterized protein LOC107767701.
  
     0.462
LOC107790920
Uncharacterized protein LOC107790920.
  
     0.456
LOC107808416
Uncharacterized protein LOC107808416.
  
     0.454
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.