STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107775468DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (809 aa)    
Predicted Functional Partners:
LOC107771390
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
   
 0.997
LOC107789473
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
   
 0.997
LOC107808204
DNA polymerase epsilon subunit 3-like.
   
 0.996
LOC107808429
DNA polymerase epsilon subunit 3-like.
   
 0.996
LOC107796644
DNA polymerase.
   
 0.989
LOC107822467
DNA polymerase.
   
 0.989
LOC107816422
Cell division control protein 45 homolog.
   
 0.983
LOC107764250
DNA polymerase zeta processivity subunit-like.
    
 0.982
LOC107765547
Probable DNA primase large subunit isoform X1.
   
 0.981
LOC107783151
DNA helicase; Belongs to the MCM family.
   
 0.981
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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