STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107776499AT-rich interactive domain-containing protein 6-like isoform X1. (569 aa)    
Predicted Functional Partners:
LOC107777060
Chromatin structure-remodeling complex protein SYD-like isoform X1.
   
 
 0.613
LOC107795710
Protein NLP9-like.
   
 
 0.613
LOC107818563
Chromatin structure-remodeling complex protein SYD-like isoform X1.
   
 
 0.613
LOC107777825
Actin-related protein 4-like; Belongs to the actin family.
    
 
 0.574
LOC107807069
Actin-related protein 4-like; Belongs to the actin family.
    
 
 0.574
LOC107811968
Actin-related protein 4 isoform X1; Belongs to the actin family.
    
 
 0.574
LOC107818079
Actin-related protein 4-like.
    
 
 0.574
LOC107764300
Chromatin structure-remodeling complex protein BSH-like.
    
 
 0.571
LOC107765782
Chromatin structure-remodeling complex protein BSH isoform X1.
    
 
 0.571
LOC107766183
Chromatin structure-remodeling complex protein BSH-like isoform X1.
    
 
 0.571
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.