STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107776500Brefeldin A-inhibited guanine nucleotide-exchange protein 1-like. (1271 aa)    
Predicted Functional Partners:
LOC107781720
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.481
LOC107763278
1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like.
    
   0.461
LOC107799611
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
   0.461
LOC107816031
1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like.
    
   0.461
LOC107782760
E3 ubiquitin-protein ligase UPL3-like.
  
    0.434
LOC107766761
ADP-ribosylation factor 1-like 2; Belongs to the small GTPase superfamily. Arf family.
    
 0.433
LOC107778016
ADP-ribosylation factor 1-like 2; Belongs to the small GTPase superfamily. Arf family.
    
 0.433
LOC107805428
ADP-ribosylation factor 1-like 2; Belongs to the small GTPase superfamily. Arf family.
    
 0.433
LOC107823941
ADP-ribosylation factor 2-like isoform X1; Belongs to the small GTPase superfamily. Arf family.
    
 0.433
LOC107761871
ADP-ribosylation factor 1-like.
    
 0.413
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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