STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107777177Uncharacterized protein LOC107777177. (76 aa)    
Predicted Functional Partners:
LOC107772902
Potassium channel SKOR-like.
  
     0.536
LOC107800201
Cytochrome c-type biogenesis protein.
  
     0.536
LOC107807140
Uncharacterized protein LOC107807140 isoform X1.
  
     0.532
LOC107769472
Transcription factor PIF1-like.
  
     0.530
LOC107811694
Uncharacterized protein LOC107811694.
  
     0.530
LOC107806901
Uncharacterized protein LOC107806901 isoform X1.
  
     0.529
LOC107828546
Uncharacterized protein LOC107828546.
  
     0.528
LOC107776416
Uncharacterized protein LOC107764869.
  
     0.516
LOC107774119
Uncharacterized protein LOC107774119.
  
     0.515
LOC107783213
Protein ENHANCED DISEASE RESISTANCE 2-like isoform X1.
  
     0.515
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.