STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107779790Uncharacterized mitochondrial protein AtMg00810-like. (243 aa)    
Predicted Functional Partners:
LOC107772776
Uncharacterized protein LOC107772776.
  
     0.535
LOC107816489
Uncharacterized protein LOC107816489.
  
     0.498
orf152
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.498
LOC107795743
Uncharacterized protein LOC107795743.
  
     0.491
LOC107829758
Uncharacterized protein LOC107829758.
  
     0.489
LOC107770383
Uncharacterized protein LOC107770383.
  
     0.487
LOC107760758
Uncharacterized protein LOC107760758.
  
     0.486
LOC107801455
Uncharacterized protein LOC107801455.
  
     0.474
LOC107808481
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.473
LOC107790323
Uncharacterized protein LOC107790323.
  
     0.469
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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