STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107779780Uncharacterized protein LOC107779780. (223 aa)    
Predicted Functional Partners:
LOC107815782
Uncharacterized protein LOC107815782.
  
     0.542
LOC107806082
Uncharacterized protein LOC107806082.
  
     0.541
LOC107784400
Uncharacterized protein LOC107784400.
  
     0.527
LOC107816462
Uncharacterized protein LOC107816462.
  
     0.527
LOC107759769
Uncharacterized protein LOC107759769.
  
     0.526
LOC107768810
Uncharacterized protein LOC107768810.
  
     0.525
LOC107763031
Uncharacterized protein LOC107763031.
  
     0.524
LOC107775810
Uncharacterized protein LOC107775810.
  
     0.520
LOC107822200
Uncharacterized protein LOC107822200.
  
     0.520
LOC107831000
Uncharacterized protein LOC107831000.
  
     0.520
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.