STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107779964Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (807 aa)    
Predicted Functional Partners:
LOC107775713
Non-specific phospholipase C2.
     
 0.837
LOC107812485
Non-specific phospholipase C2-like.
     
 0.837
LOC107807215
Diacylglycerol kinase; Belongs to the eukaryotic diacylglycerol kinase family.
     
 0.836
LOC107808611
Diacylglycerol kinase; Belongs to the eukaryotic diacylglycerol kinase family.
     
 0.830
LOC107776484
Diacylglycerol kinase; Belongs to the eukaryotic diacylglycerol kinase family.
     
 0.830
LOC107815988
Diacylglycerol kinase.
     
 0.821
LOC107824111
Diacylglycerol kinase.
     
 0.821
LOC107759925
Diacylglycerol kinase; Belongs to the eukaryotic diacylglycerol kinase family.
     
 0.820
LOC107773804
Diacylglycerol kinase; Belongs to the eukaryotic diacylglycerol kinase family.
     
 0.820
LOC107818851
Diacylglycerol kinase; Belongs to the eukaryotic diacylglycerol kinase family.
     
 0.820
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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