STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107780378Formin-like protein; Belongs to the formin-like family. (923 aa)    
Predicted Functional Partners:
LOC107764905
Uncharacterized protein LOC107764905.
    
 0.568
LOC107766535
Uncharacterized protein LOC107766535; Belongs to the adaptor complexes medium subunit family.
    
 0.568
LOC107795256
Uncharacterized protein LOC107795256 isoform X1.
    
 0.568
LOC107771620
Protein piccolo-like isoform X1.
    
 0.511
LOC107773368
Proline-rich protein 2-like.
    
 0.511
LOC107804725
Proline-rich protein 2-like.
    
 0.511
LOC107818482
Pollen-specific leucine-rich repeat extensin-like protein 2 isoform X1.
    
 0.511
LOC107762793
Rac-like GTP-binding protein 5.
    
 0.481
LOC107769585
Rac-like GTP-binding protein 5.
    
 0.481
LOC107770528
Rac-like GTP-binding protein RAC2.
    
 0.481
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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