STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107780816RNA-directed DNA polymerase homolog. (138 aa)    
Predicted Functional Partners:
LOC107796998
Uncharacterized protein LOC107796998.
  
     0.494
LOC107804898
Uncharacterized protein LOC107804898.
  
     0.490
LOC107799244
Uncharacterized protein LOC107799244.
  
     0.483
LOC107773259
Uncharacterized protein LOC107773259.
  
     0.480
LOC107830051
Uncharacterized protein LOC107830051.
  
     0.472
LOC107819217
Uncharacterized mitochondrial protein AtMg00860-like.
  
     0.470
LOC107808150
Uncharacterized protein LOC107808150.
  
     0.465
LOC107806371
Uncharacterized protein LOC107806371.
  
     0.460
LOC107825565
Uncharacterized protein LOC107825565.
  
     0.460
LOC107808515
Uncharacterized protein LOC107808515.
  
     0.448
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.