STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107781297Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (175 aa)    
Predicted Functional Partners:
LOC107782093
UPF0235 protein At5g63440 isoform X1.
    
  0.936
LOC107814906
UPF0235 protein At5g63440-like isoform X1.
    
  0.936
LOC107763122
pre-mRNA-splicing factor SYF1-like.
    
 0.755
LOC107819808
pre-mRNA-splicing factor SYF1-like.
    
 0.755
LOC107779325
Nuclear pore complex protein NUP88-like isoform X1.
    
 0.702
LOC107790996
Nuclear pore complex protein NUP88-like.
    
 0.702
LOC107768587
Low-temperature-induced cysteine proteinase-like; Belongs to the peptidase C1 family.
    
 
 0.680
LOC107776414
Cysteine proteinase RD21a-like; Belongs to the peptidase C1 family.
    
 
 0.680
LOC107787852
Cysteine proteinase RD21a-like; Belongs to the peptidase C1 family.
    
 
 0.680
LOC107795650
Low-temperature-induced cysteine proteinase-like; Belongs to the peptidase C1 family.
    
 
 0.680
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.